Introducing QuantConn: Overcoming challenging diffusion acquisitions with harmonization.
White matter alterations are increasingly implicated in neurological diseases and their progression. Diffusion-weighted magnetic resonance imaging (DW-MRI) has been included in many international-scale studies to identify alterations in white matter microstructure and connectivity. Yet, quantitative investigation of DW-MRI data is hindered by a lack of consistency due to variations in acquisition protocols, sites, and scanners. Specifically, there is a need to harmonize the preprocessing of DW-MRI datasets to ensure that compatible and reproducible quantitative metrics are derived from each site, including (1) bundle-wise microstructure measures, (2) features of white matter fiber bundles, and (3) connectomics measures. In the MICCAI CDMRI 2023 QuantConn challenge, participants are provided raw data from the same individuals taken with two different acquisition protocols on a single 4 tesla scanner in the same scanning session and asked to preprocess the data in order to minimize acquisition differences while retaining biological variation. Here, we outline the testing framework, provide baseline pre-harmonized results, and discuss the learning implications of this challenge.
Authors
Newlin Newlin, Schilling Schilling, Koudoro Koudoro, Chandio Chandio, Kanakaraj Kanakaraj, Moyer Moyer, Kelly Kelly, Genc Genc, Yang Yang, Wu Wu, Adluru Adluru, Nath Nath, Pathak Pathak, Schneider Schneider, Gade Gade, Consagra Consagra, Rathi Rathi, Hendriks Hendriks, Vilanova Vilanova, Chamberland Chamberland, Pieciak Pieciak, Ciupek Ciupek, Vega Vega, Aja-Fernández Aja-Fernández, Malawski Malawski, Ouedraogo Ouedraogo, Machnio Machnio, Thompson Thompson, Jahanshad Jahanshad, Garyfallidis Garyfallidis, Landman Landman
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