Tumor-intrinsic immune-genetic dynamics identify RNASE1 as an immune-evasion-associated biomarker and predictor of checkpoint blockade response in gastric adenocarcinoma.
Although immune checkpoint blockade (ICB) has changed treatment strategies for gastric adenocarcinoma (STAD), many patients show primary resistance. Tumor-intrinsic transcriptional heterogeneity may contribute to immune escape, but the malignant-cell programs and candidate biomarkers linked to this process remain incompletely defined. Here, we integrated single-cell transcriptomic profiles of 162,116 cells from 35 STAD samples with multiple bulk transcriptomic cohorts to characterize malignant-cell regulatory programs. Non-negative matrix factorization identified meta-program 2 (MP2), a malignant-cell program closely associated with immune-escape signatures. Through integrated co-expression analysis and machine-learning-based prioritization, RNASE1 was identified as an MP2-related candidate biomarker. High RNASE1 expression was associated with poor survival, higher immune and stromal scores, increased immune-checkpoint expression, and enrichment of ICB-response-related transcriptomic signatures. In vitro RNASE1 knockdown reduced STAD cell proliferation, migration, and invasion, supporting a functional contribution to malignant cellular phenotypes. Together, these findings suggest that RNASE1 is an immune-evasion-associated biomarker with potential value for prognosis and ICB-response stratification in STAD, while prospective clinical and in vivo validation remain necessary.
Authors
Xia Xia, Guo Guo, Zhang Zhang, Lin Lin, Guo Guo, Tian Tian, Huang Huang, Guan Guan, Xue Xue, Chen Chen
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